Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.98□□□□□ -0.49
VimP20152 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VimP20152 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VimP20152 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
VimP20152 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VimP20152 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
VimP20152 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VimP20152 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VimP20152 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
VimP20152 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VimP20152 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VimP20152 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
VimP20152 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.98□□□□□ -0.49
VimP20152 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VimP20152 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VimP20152 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VimP20152 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
VimP20152 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
VimP20152 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.98□□□□□ -0.49
VimP20152 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
VimP20152 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.97□□□□□ -0.49
VimP20152 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
VimP20152 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.97□□□□□ -0.49
VimP20152 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
VimP20152 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.97□□□□□ -0.49
VimP20152 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.97□□□□□ -0.49
VimP20152 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.97□□□□□ -0.49
VimP20152 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.97□□□□□ -0.49
VimP20152 Gm27306-201ENSMUST00000183970 107 ntBASIC11.97□□□□□ -0.49
VimP20152 Gm42612-201ENSMUST00000197986 623 ntBASIC11.97□□□□□ -0.49
VimP20152 Gm43170-201ENSMUST00000199827 612 ntBASIC11.97□□□□□ -0.49
VimP20152 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.97□□□□□ -0.49
VimP20152 Gm807-202ENSMUST00000224929 408 ntBASIC11.97□□□□□ -0.49
VimP20152 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
VimP20152 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.97□□□□□ -0.49
VimP20152 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
VimP20152 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.97□□□□□ -0.49
VimP20152 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
VimP20152 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
VimP20152 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
VimP20152 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
VimP20152 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC11.96□□□□□ -0.49
VimP20152 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Gm2231-201ENSMUST00000125661 612 ntBASIC11.96□□□□□ -0.49
VimP20152 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
VimP20152 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.96□□□□□ -0.49
VimP20152 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.96□□□□□ -0.49
VimP20152 Gm37922-201ENSMUST00000195596 455 ntBASIC11.96□□□□□ -0.49
VimP20152 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.96□□□□□ -0.49
VimP20152 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.96□□□□□ -0.49
VimP20152 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.96□□□□□ -0.49
VimP20152 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.96□□□□□ -0.49
VimP20152 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.96□□□□□ -0.49
VimP20152 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
VimP20152 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.96□□□□□ -0.5
VimP20152 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
VimP20152 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
VimP20152 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
VimP20152 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
VimP20152 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
VimP20152 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.5
VimP20152 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.96□□□□□ -0.5
VimP20152 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms