Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.06□□□□□ -0.48
Hmga1P17095 Gm14942-201ENSMUST00000119642 336 ntBASIC12.06□□□□□ -0.48
Hmga1P17095 Gm12899-201ENSMUST00000120565 551 ntBASIC12.06□□□□□ -0.48
Hmga1P17095 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.06□□□□□ -0.48
Hmga1P17095 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmga1P17095 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmga1P17095 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.06□□□□□ -0.48
Hmga1P17095 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Gm37981-201ENSMUST00000194280 535 ntBASIC12.06□□□□□ -0.48
Hmga1P17095 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.06□□□□□ -0.48
Hmga1P17095 Gm44329-201ENSMUST00000197469 112 ntBASIC12.06□□□□□ -0.48
Hmga1P17095 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmga1P17095 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmga1P17095 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmga1P17095 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.06□□□□□ -0.48
Hmga1P17095 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Hmga1P17095 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Hmga1P17095 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Hmga1P17095 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Hmga1P17095 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.05□□□□□ -0.48
Hmga1P17095 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.05□□□□□ -0.48
Hmga1P17095 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Hmga1P17095 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hmga1P17095 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.05□□□□□ -0.48
Hmga1P17095 Gm11244-201ENSMUST00000121243 237 ntBASIC12.05□□□□□ -0.48
Hmga1P17095 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.05□□□□□ -0.48
Hmga1P17095 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC12.05□□□□□ -0.48
Hmga1P17095 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hmga1P17095 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.05□□□□□ -0.48
Hmga1P17095 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Hmga1P17095 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Hmga1P17095 Gm7504-201ENSMUST00000201449 424 ntBASIC12.05□□□□□ -0.48
Hmga1P17095 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.05□□□□□ -0.48
Hmga1P17095 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Hmga1P17095 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Hmga1P17095 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Hmga1P17095 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmga1P17095 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga1P17095 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga1P17095 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga1P17095 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga1P17095 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga1P17095 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.04□□□□□ -0.48
Hmga1P17095 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hmga1P17095 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Hmga1P17095 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga1P17095 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hmga1P17095 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga1P17095 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.04□□□□□ -0.48
Hmga1P17095 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Hmga1P17095 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hmga1P17095 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.04□□□□□ -0.48
Hmga1P17095 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Hmga1P17095 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hmga1P17095 Gm23272-201ENSMUST00000104053 129 ntBASIC12.04□□□□□ -0.48
Hmga1P17095 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.04□□□□□ -0.48
Hmga1P17095 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga1P17095 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga1P17095 Gm1848-201ENSMUST00000120711 789 ntBASIC12.04□□□□□ -0.48
Hmga1P17095 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.04□□□□□ -0.48
Hmga1P17095 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hmga1P17095 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.04□□□□□ -0.48
Hmga1P17095 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.04□□□□□ -0.48
Hmga1P17095 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmga1P17095 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Hmga1P17095 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.04□□□□□ -0.48
Hmga1P17095 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms