Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rb1P13405 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.25□□□□□ -0.45
Rb1P13405 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Rb1P13405 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rb1P13405 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC12.24□□□□□ -0.45
Rb1P13405 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Gm23949-201ENSMUST00000104027 127 ntBASIC12.24□□□□□ -0.45
Rb1P13405 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rb1P13405 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC12.24□□□□□ -0.45
Rb1P13405 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rb1P13405 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rb1P13405 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.24□□□□□ -0.45
Rb1P13405 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Rb1P13405 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.24□□□□□ -0.45
Rb1P13405 BC043934-202ENSMUST00000185694 2356 ntBASIC12.24□□□□□ -0.45
Rb1P13405 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC12.24□□□□□ -0.45
Rb1P13405 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.24□□□□□ -0.45
Rb1P13405 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.24□□□□□ -0.45
Rb1P13405 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.24□□□□□ -0.45
Rb1P13405 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.24□□□□□ -0.45
Rb1P13405 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.24□□□□□ -0.45
Rb1P13405 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Rb1P13405 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.24□□□□□ -0.45
Rb1P13405 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.24□□□□□ -0.45
Rb1P13405 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.24□□□□□ -0.45
Rb1P13405 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Rb1P13405 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rb1P13405 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rb1P13405 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.23□□□□□ -0.45
Rb1P13405 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Rb1P13405 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rb1P13405 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rb1P13405 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.23□□□□□ -0.45
Rb1P13405 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.23□□□□□ -0.45
Rb1P13405 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rb1P13405 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Gm13315-201ENSMUST00000120376 991 ntBASIC12.23□□□□□ -0.45
Rb1P13405 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rb1P13405 Gm11450-201ENSMUST00000121144 333 ntBASIC12.23□□□□□ -0.45
Rb1P13405 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.23□□□□□ -0.45
Rb1P13405 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.23□□□□□ -0.45
Rb1P13405 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rb1P13405 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.23□□□□□ -0.45
Rb1P13405 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.23□□□□□ -0.45
Rb1P13405 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.23□□□□□ -0.45
Rb1P13405 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Rb1P13405 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.23□□□□□ -0.45
Rb1P13405 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rb1P13405 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rb1P13405 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rb1P13405 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rb1P13405 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.22□□□□□ -0.45
Rb1P13405 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms