Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hoxc6P10629 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.11□□□□□ -0.31
Hoxc6P10629 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Hoxc6P10629 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.1□□□□□ -0.31
Hoxc6P10629 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.1□□□□□ -0.31
Hoxc6P10629 Gm12783-201ENSMUST00000121425 397 ntBASIC13.1□□□□□ -0.31
Hoxc6P10629 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.1□□□□□ -0.31
Hoxc6P10629 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.1□□□□□ -0.31
Hoxc6P10629 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Hoxc6P10629 Mir8093-201ENSMUST00000185043 137 ntBASIC13.1□□□□□ -0.31
Hoxc6P10629 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.1□□□□□ -0.31
Hoxc6P10629 Gm42816-201ENSMUST00000198433 325 ntBASIC13.1□□□□□ -0.31
Hoxc6P10629 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC13.1□□□□□ -0.31
Hoxc6P10629 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.1□□□□□ -0.31
Hoxc6P10629 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Hoxc6P10629 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Hoxc6P10629 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hoxc6P10629 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Hoxc6P10629 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.09□□□□□ -0.31
Hoxc6P10629 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.09□□□□□ -0.31
Hoxc6P10629 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Hoxc6P10629 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Hoxc6P10629 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Hoxc6P10629 Gm5621-201ENSMUST00000187303 640 ntBASIC13.09□□□□□ -0.31
Hoxc6P10629 Gm37826-201ENSMUST00000195329 322 ntBASIC13.09□□□□□ -0.31
Hoxc6P10629 Gm5982-201ENSMUST00000196234 512 ntBASIC13.09□□□□□ -0.31
Hoxc6P10629 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.09□□□□□ -0.31
Hoxc6P10629 Gm18463-201ENSMUST00000207258 474 ntBASIC13.09□□□□□ -0.31
Hoxc6P10629 Gm18460-201ENSMUST00000208088 464 ntBASIC13.09□□□□□ -0.31
Hoxc6P10629 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.09□□□□□ -0.31
Hoxc6P10629 AC159376.1-201ENSMUST00000218504 630 ntBASIC13.09□□□□□ -0.31
Hoxc6P10629 Gm18514-201ENSMUST00000218980 436 ntBASIC13.09□□□□□ -0.31
Hoxc6P10629 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.09□□□□□ -0.31
Hoxc6P10629 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.09□□□□□ -0.31
Hoxc6P10629 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.09□□□□□ -0.31
Hoxc6P10629 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Hoxc6P10629 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Hoxc6P10629 Gm16380-201ENSMUST00000077997 478 ntBASIC13.09□□□□□ -0.31
Hoxc6P10629 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Hoxc6P10629 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.09□□□□□ -0.31
Hoxc6P10629 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.09□□□□□ -0.31
Hoxc6P10629 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Hoxc6P10629 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Hoxc6P10629 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hoxc6P10629 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Hoxc6P10629 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.08□□□□□ -0.32
Hoxc6P10629 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Hoxc6P10629 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.08□□□□□ -0.32
Hoxc6P10629 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.08□□□□□ -0.32
Hoxc6P10629 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Hoxc6P10629 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hoxc6P10629 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Hoxc6P10629 Gm14807-201ENSMUST00000116640 983 ntBASIC13.08□□□□□ -0.32
Hoxc6P10629 Gm12274-201ENSMUST00000120062 385 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms