Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
Hoxc9P09633 Gm18294-201ENSMUST00000176980 1748 ntBASIC15.26■□□□□ 0.03
Hoxc9P09633 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 AC158636.1-201ENSMUST00000220118 1393 ntBASIC15.25■□□□□ 0.03
Hoxc9P09633 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Hoxc9P09633 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Gm21759-201ENSMUST00000178345 1828 ntBASIC15.25■□□□□ 0.03
Hoxc9P09633 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Gm13422-201ENSMUST00000118834 504 ntBASIC15.25■□□□□ 0.03
Hoxc9P09633 Gm8723-201ENSMUST00000166076 820 ntBASIC15.25■□□□□ 0.03
Hoxc9P09633 Gm8701-201ENSMUST00000169259 874 ntBASIC15.25■□□□□ 0.03
Hoxc9P09633 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Hoxc9P09633 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Gm9884-201ENSMUST00000194343 1222 ntBASIC15.25■□□□□ 0.03
Hoxc9P09633 Gm43692-201ENSMUST00000198236 1062 ntBASIC15.25■□□□□ 0.03
Hoxc9P09633 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Gm35713-201ENSMUST00000210516 199 ntBASIC15.25■□□□□ 0.03
Hoxc9P09633 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Hoxc9P09633 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Hoxc9P09633 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Hoxc9P09633 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hoxc9P09633 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hoxc9P09633 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hoxc9P09633 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Gm14071-201ENSMUST00000117817 509 ntBASIC15.24■□□□□ 0.03
Hoxc9P09633 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Hoxc9P09633 Gm12791-201ENSMUST00000120788 655 ntBASIC15.24■□□□□ 0.03
Hoxc9P09633 Gm13022-201ENSMUST00000121181 285 ntBASIC15.24■□□□□ 0.03
Hoxc9P09633 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC15.24■□□□□ 0.03
Hoxc9P09633 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC15.24■□□□□ 0.03
Hoxc9P09633 Gm6548-201ENSMUST00000167498 1165 ntBASIC15.24■□□□□ 0.03
Hoxc9P09633 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Hoxc9P09633 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC15.24■□□□□ 0.03
Hoxc9P09633 CT009527.1-201ENSMUST00000224205 339 ntBASIC15.24■□□□□ 0.03
Hoxc9P09633 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Hoxc9P09633 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Hoxc9P09633 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.24■□□□□ 0.03
Hoxc9P09633 Gm8146-201ENSMUST00000192106 1847 ntBASIC15.24■□□□□ 0.03
Hoxc9P09633 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.24■□□□□ 0.03
Hoxc9P09633 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hoxc9P09633 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Hoxc9P09633 Gm15784-201ENSMUST00000120260 1462 ntBASIC15.23■□□□□ 0.03
Hoxc9P09633 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Gm14270-201ENSMUST00000118388 846 ntBASIC15.23■□□□□ 0.03
Hoxc9P09633 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC15.23■□□□□ 0.03
Hoxc9P09633 Gm9111-201ENSMUST00000219394 709 ntBASIC15.23■□□□□ 0.03
Hoxc9P09633 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Hoxc9P09633 Gm25201-201ENSMUST00000083093 170 ntBASIC15.23■□□□□ 0.03
Hoxc9P09633 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Hoxc9P09633 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hoxc9P09633 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms