Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC17.57■□□□□ 0.4
NclP09405 Gm44551-201ENSMUST00000208804 171 ntBASIC17.57■□□□□ 0.4
NclP09405 Gm45550-201ENSMUST00000209380 946 ntBASIC17.57■□□□□ 0.4
NclP09405 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC17.57■□□□□ 0.4
NclP09405 Gm18974-201ENSMUST00000221478 1031 ntBASIC17.57■□□□□ 0.4
NclP09405 AC171241.1-201ENSMUST00000228144 1166 ntBASIC17.57■□□□□ 0.4
NclP09405 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
NclP09405 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NclP09405 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NclP09405 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NclP09405 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NclP09405 Gm9279-201ENSMUST00000223175 1606 ntBASIC17.57■□□□□ 0.4
NclP09405 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
NclP09405 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
NclP09405 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NclP09405 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NclP09405 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
NclP09405 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NclP09405 Gm37269-201ENSMUST00000193906 1891 ntBASIC17.56■□□□□ 0.4
NclP09405 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NclP09405 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Gm6903-201ENSMUST00000160509 1366 ntBASIC17.56■□□□□ 0.4
NclP09405 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC17.56■□□□□ 0.4
NclP09405 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
NclP09405 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC17.56■□□□□ 0.4
NclP09405 Gm13888-201ENSMUST00000119148 422 ntBASIC17.56■□□□□ 0.4
NclP09405 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC17.56■□□□□ 0.4
NclP09405 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC17.56■□□□□ 0.4
NclP09405 Gm44545-201ENSMUST00000208262 746 ntBASIC17.56■□□□□ 0.4
NclP09405 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC17.56■□□□□ 0.4
NclP09405 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NclP09405 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
NclP09405 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NclP09405 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Gm45743-201ENSMUST00000212701 2795 ntBASIC17.56■□□□□ 0.4
NclP09405 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NclP09405 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NclP09405 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NclP09405 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NclP09405 Gm2238-201ENSMUST00000192074 3669 ntBASIC17.55■□□□□ 0.4
NclP09405 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NclP09405 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NclP09405 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NclP09405 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NclP09405 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NclP09405 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NclP09405 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC17.55■□□□□ 0.4
NclP09405 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC17.55■□□□□ 0.4
NclP09405 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NclP09405 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NclP09405 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NclP09405 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NclP09405 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC17.55■□□□□ 0.4
NclP09405 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NclP09405 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC17.55■□□□□ 0.4
NclP09405 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NclP09405 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NclP09405 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NclP09405 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NclP09405 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NclP09405 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NclP09405 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC17.54■□□□□ 0.4
NclP09405 n-R5s64-201ENSMUST00000102019 119 ntBASIC17.54■□□□□ 0.4
NclP09405 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NclP09405 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC17.54■□□□□ 0.4
NclP09405 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC17.54■□□□□ 0.4
NclP09405 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NclP09405 Gm23045-201ENSMUST00000175041 96 ntBASIC17.54■□□□□ 0.4
NclP09405 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC17.54■□□□□ 0.4
NclP09405 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NclP09405 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NclP09405 Gm44270-201ENSMUST00000203084 1234 ntBASIC17.54■□□□□ 0.4
NclP09405 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NclP09405 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC17.54■□□□□ 0.4
NclP09405 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC17.54■□□□□ 0.4
NclP09405 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NclP09405 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NclP09405 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NclP09405 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NclP09405 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NclP09405 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NclP09405 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NclP09405 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NclP09405 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NclP09405 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NclP09405 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms