Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.2□□□□□ -0.62
ApoeP08226 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.2□□□□□ -0.62
ApoeP08226 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.2□□□□□ -0.62
ApoeP08226 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
ApoeP08226 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
ApoeP08226 Gm16177-201ENSMUST00000120728 718 ntBASIC11.2□□□□□ -0.62
ApoeP08226 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.2□□□□□ -0.62
ApoeP08226 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Gm24548-201ENSMUST00000158650 108 ntBASIC11.2□□□□□ -0.62
ApoeP08226 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.2□□□□□ -0.62
ApoeP08226 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.2□□□□□ -0.62
ApoeP08226 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Gm10254-201ENSMUST00000052888 867 ntBASIC11.2□□□□□ -0.62
ApoeP08226 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
ApoeP08226 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.2□□□□□ -0.62
ApoeP08226 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
ApoeP08226 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
ApoeP08226 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
ApoeP08226 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
ApoeP08226 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.19□□□□□ -0.62
ApoeP08226 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.19□□□□□ -0.62
ApoeP08226 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
ApoeP08226 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
ApoeP08226 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
ApoeP08226 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.19□□□□□ -0.62
ApoeP08226 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
ApoeP08226 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Gm15806-201ENSMUST00000120696 955 ntBASIC11.19□□□□□ -0.62
ApoeP08226 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.19□□□□□ -0.62
ApoeP08226 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.19□□□□□ -0.62
ApoeP08226 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.19□□□□□ -0.62
ApoeP08226 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.19□□□□□ -0.62
ApoeP08226 Gm6745-201ENSMUST00000199216 526 ntBASIC11.19□□□□□ -0.62
ApoeP08226 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
ApoeP08226 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
ApoeP08226 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ApoeP08226 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
ApoeP08226 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.18□□□□□ -0.62
ApoeP08226 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.18□□□□□ -0.62
ApoeP08226 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.18□□□□□ -0.62
ApoeP08226 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.18□□□□□ -0.62
ApoeP08226 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ApoeP08226 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms