Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.57□□□□□ -0.72
P06344 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P06344 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
P06344 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P06344 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC10.56□□□□□ -0.72
P06344 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
P06344 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.56□□□□□ -0.72
P06344 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.56□□□□□ -0.72
P06344 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
P06344 Gm12857-201ENSMUST00000117678 592 ntBASIC10.56□□□□□ -0.72
P06344 Gm11331-201ENSMUST00000119764 288 ntBASIC10.56□□□□□ -0.72
P06344 Gm11941-201ENSMUST00000119904 610 ntBASIC10.56□□□□□ -0.72
P06344 Gm11660-201ENSMUST00000120955 412 ntBASIC10.56□□□□□ -0.72
P06344 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
P06344 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.56□□□□□ -0.72
P06344 Gm28686-201ENSMUST00000187404 609 ntBASIC10.56□□□□□ -0.72
P06344 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.56□□□□□ -0.72
P06344 Spcs1-203ENSMUST00000226374 592 ntBASIC10.56□□□□□ -0.72
P06344 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
P06344 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
P06344 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.56□□□□□ -0.72
P06344 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.56□□□□□ -0.72
P06344 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.56□□□□□ -0.72
P06344 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.56□□□□□ -0.72
P06344 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P06344 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P06344 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P06344 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
P06344 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.55□□□□□ -0.72
P06344 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
P06344 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
P06344 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.55□□□□□ -0.72
P06344 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.55□□□□□ -0.72
P06344 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.55□□□□□ -0.72
P06344 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
P06344 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.55□□□□□ -0.72
P06344 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
P06344 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Gm7851-201ENSMUST00000117574 323 ntBASIC10.55□□□□□ -0.72
P06344 Gm14724-201ENSMUST00000118400 537 ntBASIC10.55□□□□□ -0.72
P06344 Gm8566-201ENSMUST00000120174 465 ntBASIC10.55□□□□□ -0.72
P06344 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.55□□□□□ -0.72
P06344 Gm23085-201ENSMUST00000157849 293 ntBASIC10.55□□□□□ -0.72
P06344 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.55□□□□□ -0.72
P06344 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.55□□□□□ -0.72
P06344 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Gm8100-201ENSMUST00000182906 988 ntBASIC10.55□□□□□ -0.72
P06344 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.55□□□□□ -0.72
P06344 Gm2965-201ENSMUST00000198365 343 ntBASIC10.55□□□□□ -0.72
P06344 Gm19287-201ENSMUST00000203190 358 ntBASIC10.55□□□□□ -0.72
P06344 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.55□□□□□ -0.72
P06344 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.55□□□□□ -0.72
P06344 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.55□□□□□ -0.72
P06344 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.55□□□□□ -0.72
P06344 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
P06344 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.55□□□□□ -0.72
P06344 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P06344 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms