Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
PrnpP04925 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.24□□□□□ -0.45
PrnpP04925 Gm12247-201ENSMUST00000117585 670 ntBASIC12.24□□□□□ -0.45
PrnpP04925 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.24□□□□□ -0.45
PrnpP04925 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.24□□□□□ -0.45
PrnpP04925 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
PrnpP04925 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
PrnpP04925 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.24□□□□□ -0.45
PrnpP04925 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
PrnpP04925 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.24□□□□□ -0.45
PrnpP04925 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.24□□□□□ -0.45
PrnpP04925 Gm37826-201ENSMUST00000195329 322 ntBASIC12.24□□□□□ -0.45
PrnpP04925 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.24□□□□□ -0.45
PrnpP04925 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.24□□□□□ -0.45
PrnpP04925 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.24□□□□□ -0.45
PrnpP04925 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.24□□□□□ -0.45
PrnpP04925 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.24□□□□□ -0.45
PrnpP04925 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.24□□□□□ -0.45
PrnpP04925 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
PrnpP04925 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.24□□□□□ -0.45
PrnpP04925 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
PrnpP04925 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PrnpP04925 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.23□□□□□ -0.45
PrnpP04925 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.23□□□□□ -0.45
PrnpP04925 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
PrnpP04925 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
PrnpP04925 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
PrnpP04925 Gm13600-201ENSMUST00000117949 744 ntBASIC12.23□□□□□ -0.45
PrnpP04925 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.23□□□□□ -0.45
PrnpP04925 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.23□□□□□ -0.45
PrnpP04925 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.23□□□□□ -0.45
PrnpP04925 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.23□□□□□ -0.45
PrnpP04925 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.23□□□□□ -0.45
PrnpP04925 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
PrnpP04925 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
PrnpP04925 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
PrnpP04925 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
PrnpP04925 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.23□□□□□ -0.45
PrnpP04925 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
PrnpP04925 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.23□□□□□ -0.45
PrnpP04925 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.23□□□□□ -0.45
PrnpP04925 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
PrnpP04925 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
PrnpP04925 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
PrnpP04925 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.22□□□□□ -0.45
PrnpP04925 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PrnpP04925 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PrnpP04925 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms