Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm16296-201ENSMUST00000159905 325 ntBASIC10.4□□□□□ -0.74
P04224 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.4□□□□□ -0.74
P04224 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.4□□□□□ -0.74
P04224 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
P04224 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.4□□□□□ -0.74
P04224 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Gm5356-201ENSMUST00000093326 615 ntBASIC10.4□□□□□ -0.74
P04224 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.4□□□□□ -0.74
P04224 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
P04224 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
P04224 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
P04224 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
P04224 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
P04224 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
P04224 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
P04224 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
P04224 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
P04224 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
P04224 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
P04224 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Snord83b-201ENSMUST00000104546 94 ntBASIC10.39□□□□□ -0.75
P04224 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Gm12384-201ENSMUST00000119228 919 ntBASIC10.39□□□□□ -0.75
P04224 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.39□□□□□ -0.75
P04224 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.39□□□□□ -0.75
P04224 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Gm4768-201ENSMUST00000206199 686 ntBASIC10.39□□□□□ -0.75
P04224 Gm45384-201ENSMUST00000210451 277 ntBASIC10.39□□□□□ -0.75
P04224 Gm9908-201ENSMUST00000211534 448 ntBASIC10.39□□□□□ -0.75
P04224 Gm19163-201ENSMUST00000223313 780 ntBASIC10.39□□□□□ -0.75
P04224 AC155237.1-201ENSMUST00000226196 1279 ntBASIC10.39□□□□□ -0.75
P04224 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.39□□□□□ -0.75
P04224 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
P04224 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
P04224 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.39□□□□□ -0.75
P04224 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.39□□□□□ -0.75
P04224 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
P04224 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
P04224 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.39□□□□□ -0.75
P04224 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
P04224 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04224 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
P04224 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04224 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04224 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
P04224 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04224 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04224 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04224 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.38□□□□□ -0.75
P04224 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04224 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.38□□□□□ -0.75
P04224 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04224 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
P04224 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04224 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.38□□□□□ -0.75
P04224 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04224 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04224 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04224 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
P04224 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
P04224 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms