Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Hoxa3P02831 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.96□□□□□ -0.81
Hoxa3P02831 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Hoxa3P02831 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.96□□□□□ -0.81
Hoxa3P02831 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Hoxa3P02831 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Hoxa3P02831 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.96□□□□□ -0.81
Hoxa3P02831 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.96□□□□□ -0.81
Hoxa3P02831 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Hoxa3P02831 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.96□□□□□ -0.81
Hoxa3P02831 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.96□□□□□ -0.81
Hoxa3P02831 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Hoxa3P02831 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hoxa3P02831 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.96□□□□□ -0.82
Hoxa3P02831 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.96□□□□□ -0.82
Hoxa3P02831 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Hoxa3P02831 Gm18711-201ENSMUST00000199341 750 ntBASIC9.96□□□□□ -0.82
Hoxa3P02831 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.96□□□□□ -0.82
Hoxa3P02831 Gm44882-201ENSMUST00000205702 802 ntBASIC9.96□□□□□ -0.82
Hoxa3P02831 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC9.96□□□□□ -0.82
Hoxa3P02831 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.96□□□□□ -0.82
Hoxa3P02831 CT571245.2-201ENSMUST00000218421 305 ntBASIC9.96□□□□□ -0.82
Hoxa3P02831 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hoxa3P02831 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hoxa3P02831 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hoxa3P02831 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hoxa3P02831 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.96□□□□□ -0.82
Hoxa3P02831 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.96□□□□□ -0.82
Hoxa3P02831 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.96□□□□□ -0.82
Hoxa3P02831 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.96□□□□□ -0.82
Hoxa3P02831 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hoxa3P02831 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hoxa3P02831 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hoxa3P02831 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.96□□□□□ -0.82
Hoxa3P02831 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.96□□□□□ -0.82
Hoxa3P02831 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Hoxa3P02831 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hoxa3P02831 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hoxa3P02831 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.96□□□□□ -0.82
Hoxa3P02831 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hoxa3P02831 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Hoxa3P02831 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Hoxa3P02831 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Hoxa3P02831 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.95□□□□□ -0.82
Hoxa3P02831 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC9.95□□□□□ -0.82
Hoxa3P02831 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Hoxa3P02831 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Hoxa3P02831 Gm23596-201ENSMUST00000104304 132 ntBASIC9.95□□□□□ -0.82
Hoxa3P02831 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Gm11509-201ENSMUST00000117358 325 ntBASIC9.95□□□□□ -0.82
Hoxa3P02831 Gm13035-201ENSMUST00000117496 342 ntBASIC9.95□□□□□ -0.82
Hoxa3P02831 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.95□□□□□ -0.82
Hoxa3P02831 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.95□□□□□ -0.82
Hoxa3P02831 Gm14247-201ENSMUST00000120950 237 ntBASIC9.95□□□□□ -0.82
Hoxa3P02831 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.95□□□□□ -0.82
Hoxa3P02831 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC9.95□□□□□ -0.82
Hoxa3P02831 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.95□□□□□ -0.82
Hoxa3P02831 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.95□□□□□ -0.82
Hoxa3P02831 Gm8546-201ENSMUST00000178288 1264 ntBASIC9.95□□□□□ -0.82
Hoxa3P02831 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC9.95□□□□□ -0.82
Hoxa3P02831 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.95□□□□□ -0.82
Hoxa3P02831 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Spcs1-203ENSMUST00000226374 592 ntBASIC9.95□□□□□ -0.82
Hoxa3P02831 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.95□□□□□ -0.82
Hoxa3P02831 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Gm10702-201ENSMUST00000098929 1268 ntBASIC9.95□□□□□ -0.82
Hoxa3P02831 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Hoxa3P02831 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Gm18782-201ENSMUST00000209023 1399 ntBASIC9.95□□□□□ -0.82
Hoxa3P02831 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Hoxa3P02831 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.95□□□□□ -0.82
Hoxa3P02831 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Hoxa3P02831 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.95□□□□□ -0.82
Hoxa3P02831 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.95□□□□□ -0.82
Hoxa3P02831 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Hoxa3P02831 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms