Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
TcraP01849 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC8.64□□□□□ -1.03
TcraP01849 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC8.64□□□□□ -1.03
TcraP01849 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC8.64□□□□□ -1.03
TcraP01849 Gm2495-201ENSMUST00000191160 466 ntBASIC8.64□□□□□ -1.03
TcraP01849 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC8.64□□□□□ -1.03
TcraP01849 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
TcraP01849 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC8.64□□□□□ -1.03
TcraP01849 AL732506.1-201ENSMUST00000226420 281 ntBASIC8.64□□□□□ -1.03
TcraP01849 AC150560.1-201ENSMUST00000227731 1187 ntBASIC8.64□□□□□ -1.03
TcraP01849 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
TcraP01849 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
TcraP01849 Gm5356-201ENSMUST00000093326 615 ntBASIC8.64□□□□□ -1.03
TcraP01849 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC8.64□□□□□ -1.03
TcraP01849 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
TcraP01849 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Gm6992-201ENSMUST00000217973 1607 ntBASIC8.64□□□□□ -1.03
TcraP01849 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC8.64□□□□□ -1.03
TcraP01849 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
TcraP01849 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC8.64□□□□□ -1.03
TcraP01849 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
TcraP01849 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
TcraP01849 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC8.64□□□□□ -1.03
TcraP01849 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
TcraP01849 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
TcraP01849 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
TcraP01849 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC8.63□□□□□ -1.03
TcraP01849 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
TcraP01849 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC8.63□□□□□ -1.03
TcraP01849 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
TcraP01849 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC8.63□□□□□ -1.03
TcraP01849 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC8.63□□□□□ -1.03
TcraP01849 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC8.63□□□□□ -1.03
TcraP01849 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
TcraP01849 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC8.63□□□□□ -1.03
TcraP01849 AC093022.4-203ENSMUST00000228523 2657 ntBASIC8.63□□□□□ -1.03
TcraP01849 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
TcraP01849 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
TcraP01849 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
TcraP01849 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
TcraP01849 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC8.62□□□□□ -1.03
TcraP01849 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TcraP01849 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms