Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igh-VJ558P01758 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Mir8093-201ENSMUST00000185043 137 ntBASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Gm5982-201ENSMUST00000196234 512 ntBASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Gm43184-201ENSMUST00000197247 542 ntBASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Gm44262-201ENSMUST00000204969 372 ntBASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Gm45433-201ENSMUST00000209386 247 ntBASIC10.21□□□□□ -0.77
Igh-VJ558P01758 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Gm270-201ENSMUST00000223010 976 ntBASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Igh-VJ558P01758 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-VJ558P01758 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.21□□□□□ -0.78
Igh-VJ558P01758 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Gm12380-201ENSMUST00000119012 544 ntBASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Gm24749-201ENSMUST00000157838 343 ntBASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Gm7003-201ENSMUST00000195089 312 ntBASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.2□□□□□ -0.78
Igh-VJ558P01758 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms