Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.41□□□□□ -0.1
Cops6O88545 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.41□□□□□ -0.1
Cops6O88545 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC14.41□□□□□ -0.1
Cops6O88545 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC14.41□□□□□ -0.1
Cops6O88545 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC14.41□□□□□ -0.1
Cops6O88545 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC14.41□□□□□ -0.1
Cops6O88545 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.41□□□□□ -0.1
Cops6O88545 AC102368.1-201ENSMUST00000227161 892 ntBASIC14.41□□□□□ -0.1
Cops6O88545 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.41□□□□□ -0.1
Cops6O88545 Gm4978-201ENSMUST00000071565 801 ntBASIC14.41□□□□□ -0.1
Cops6O88545 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cops6O88545 Gm23105-201ENSMUST00000083719 134 ntBASIC14.41□□□□□ -0.1
Cops6O88545 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cops6O88545 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.41□□□□□ -0.1
Cops6O88545 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cops6O88545 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cops6O88545 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Cops6O88545 Gm21358-201ENSMUST00000191645 1659 ntBASIC14.4□□□□□ -0.1
Cops6O88545 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Gm11675-201ENSMUST00000121873 832 ntBASIC14.4□□□□□ -0.1
Cops6O88545 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cops6O88545 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Cops6O88545 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.4□□□□□ -0.1
Cops6O88545 Gm24398-201ENSMUST00000157870 109 ntBASIC14.4□□□□□ -0.1
Cops6O88545 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC14.4□□□□□ -0.1
Cops6O88545 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.4□□□□□ -0.1
Cops6O88545 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.4□□□□□ -0.1
Cops6O88545 Gm45594-201ENSMUST00000211717 241 ntBASIC14.4□□□□□ -0.1
Cops6O88545 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.4□□□□□ -0.1
Cops6O88545 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC14.4□□□□□ -0.1
Cops6O88545 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cops6O88545 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cops6O88545 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cops6O88545 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cops6O88545 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cops6O88545 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cops6O88545 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.39□□□□□ -0.11
Cops6O88545 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops6O88545 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.39□□□□□ -0.11
Cops6O88545 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops6O88545 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cops6O88545 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops6O88545 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops6O88545 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops6O88545 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.39□□□□□ -0.11
Cops6O88545 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC14.39□□□□□ -0.11
Cops6O88545 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops6O88545 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.39□□□□□ -0.11
Cops6O88545 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC14.39□□□□□ -0.11
Cops6O88545 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops6O88545 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.39□□□□□ -0.11
Cops6O88545 Gm19009-201ENSMUST00000223072 823 ntBASIC14.39□□□□□ -0.11
Cops6O88545 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops6O88545 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops6O88545 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.39□□□□□ -0.11
Cops6O88545 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops6O88545 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cops6O88545 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Cops6O88545 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops6O88545 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops6O88545 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.39□□□□□ -0.11
Cops6O88545 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cops6O88545 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cops6O88545 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cops6O88545 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Cops6O88545 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms