Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.93□□□□□ -0.5
Chrna4O70174 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.93□□□□□ -0.5
Chrna4O70174 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.93□□□□□ -0.5
Chrna4O70174 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Chrna4O70174 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.93□□□□□ -0.5
Chrna4O70174 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Chrna4O70174 Gm11960-201ENSMUST00000122068 925 ntBASIC11.93□□□□□ -0.5
Chrna4O70174 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.93□□□□□ -0.5
Chrna4O70174 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.93□□□□□ -0.5
Chrna4O70174 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.93□□□□□ -0.5
Chrna4O70174 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.93□□□□□ -0.5
Chrna4O70174 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Chrna4O70174 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Gm43184-201ENSMUST00000197247 542 ntBASIC11.93□□□□□ -0.5
Chrna4O70174 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.93□□□□□ -0.5
Chrna4O70174 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.93□□□□□ -0.5
Chrna4O70174 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Chrna4O70174 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.93□□□□□ -0.5
Chrna4O70174 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Chrna4O70174 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Chrna4O70174 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.92□□□□□ -0.5
Chrna4O70174 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.92□□□□□ -0.5
Chrna4O70174 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.92□□□□□ -0.5
Chrna4O70174 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Chrna4O70174 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.92□□□□□ -0.5
Chrna4O70174 Gm11700-201ENSMUST00000119409 403 ntBASIC11.92□□□□□ -0.5
Chrna4O70174 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Chrna4O70174 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.92□□□□□ -0.5
Chrna4O70174 Gm4310-201ENSMUST00000177847 889 ntBASIC11.92□□□□□ -0.5
Chrna4O70174 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.92□□□□□ -0.5
Chrna4O70174 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Gm270-201ENSMUST00000223010 976 ntBASIC11.92□□□□□ -0.5
Chrna4O70174 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.92□□□□□ -0.5
Chrna4O70174 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.92□□□□□ -0.5
Chrna4O70174 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Gm26448-201ENSMUST00000082446 203 ntBASIC11.92□□□□□ -0.5
Chrna4O70174 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.92□□□□□ -0.5
Chrna4O70174 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Chrna4O70174 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chrna4O70174 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chrna4O70174 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Chrna4O70174 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chrna4O70174 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Chrna4O70174 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chrna4O70174 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chrna4O70174 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chrna4O70174 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.91□□□□□ -0.5
Chrna4O70174 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chrna4O70174 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chrna4O70174 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chrna4O70174 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.91□□□□□ -0.5
Chrna4O70174 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms