Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.58□□□□□ -0.56
Npc1O35604 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Npc1O35604 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Npc1O35604 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Npc1O35604 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Npc1O35604 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.57□□□□□ -0.56
Npc1O35604 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Npc1O35604 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.57□□□□□ -0.56
Npc1O35604 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.57□□□□□ -0.56
Npc1O35604 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.57□□□□□ -0.56
Npc1O35604 Gm12501-201ENSMUST00000119163 529 ntBASIC11.57□□□□□ -0.56
Npc1O35604 Gm11941-201ENSMUST00000119904 610 ntBASIC11.57□□□□□ -0.56
Npc1O35604 Gm12196-201ENSMUST00000120954 262 ntBASIC11.57□□□□□ -0.56
Npc1O35604 Gm12566-201ENSMUST00000121479 359 ntBASIC11.57□□□□□ -0.56
Npc1O35604 Gm12164-201ENSMUST00000121695 551 ntBASIC11.57□□□□□ -0.56
Npc1O35604 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.57□□□□□ -0.56
Npc1O35604 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.57□□□□□ -0.56
Npc1O35604 Mir3102-201ENSMUST00000175555 104 ntBASIC11.57□□□□□ -0.56
Npc1O35604 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.57□□□□□ -0.56
Npc1O35604 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.57□□□□□ -0.56
Npc1O35604 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.57□□□□□ -0.56
Npc1O35604 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.57□□□□□ -0.56
Npc1O35604 Gm2965-201ENSMUST00000198365 343 ntBASIC11.57□□□□□ -0.56
Npc1O35604 Gm7848-201ENSMUST00000210739 718 ntBASIC11.57□□□□□ -0.56
Npc1O35604 Gm2553-201ENSMUST00000215986 605 ntBASIC11.57□□□□□ -0.56
Npc1O35604 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.57□□□□□ -0.56
Npc1O35604 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Npc1O35604 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Npc1O35604 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Npc1O35604 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.57□□□□□ -0.56
Npc1O35604 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Npc1O35604 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Npc1O35604 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Npc1O35604 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npc1O35604 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Npc1O35604 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npc1O35604 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Npc1O35604 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Npc1O35604 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.56□□□□□ -0.56
Npc1O35604 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npc1O35604 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.56□□□□□ -0.56
Npc1O35604 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npc1O35604 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npc1O35604 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Npc1O35604 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npc1O35604 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Npc1O35604 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.56□□□□□ -0.56
Npc1O35604 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Npc1O35604 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.56□□□□□ -0.56
Npc1O35604 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Npc1O35604 Gm11450-201ENSMUST00000121144 333 ntBASIC11.56□□□□□ -0.56
Npc1O35604 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.56□□□□□ -0.56
Npc1O35604 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Npc1O35604 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Npc1O35604 Gm3332-201ENSMUST00000189337 928 ntBASIC11.56□□□□□ -0.56
Npc1O35604 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Npc1O35604 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Npc1O35604 Gm4482-201ENSMUST00000200876 742 ntBASIC11.56□□□□□ -0.56
Npc1O35604 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 171.4 ms