Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Polr1aO35134 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Polr1aO35134 Gm13039-201ENSMUST00000118638 794 ntBASIC17.88■□□□□ 0.45
Polr1aO35134 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Gm14165-201ENSMUST00000121456 952 ntBASIC17.88■□□□□ 0.45
Polr1aO35134 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Polr1aO35134 Gm3318-201ENSMUST00000217604 1183 ntBASIC17.88■□□□□ 0.45
Polr1aO35134 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Polr1aO35134 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Polr1aO35134 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.87■□□□□ 0.45
Polr1aO35134 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Polr1aO35134 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.87■□□□□ 0.45
Polr1aO35134 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC17.87■□□□□ 0.45
Polr1aO35134 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC17.87■□□□□ 0.45
Polr1aO35134 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC17.87■□□□□ 0.45
Polr1aO35134 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC17.87■□□□□ 0.45
Polr1aO35134 Gm9102-201ENSMUST00000219250 465 ntBASIC17.87■□□□□ 0.45
Polr1aO35134 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Gm14005-210ENSMUST00000225087 1413 ntBASIC17.87■□□□□ 0.45
Polr1aO35134 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC17.87■□□□□ 0.45
Polr1aO35134 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Polr1aO35134 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Polr1aO35134 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Polr1aO35134 Gm12712-201ENSMUST00000120676 801 ntBASIC17.86■□□□□ 0.45
Polr1aO35134 Gm16547-201ENSMUST00000159474 293 ntBASIC17.86■□□□□ 0.45
Polr1aO35134 Gm24328-201ENSMUST00000175104 67 ntBASIC17.86■□□□□ 0.45
Polr1aO35134 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC17.86■□□□□ 0.45
Polr1aO35134 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC17.86■□□□□ 0.45
Polr1aO35134 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC17.86■□□□□ 0.45
Polr1aO35134 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr1aO35134 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC17.86■□□□□ 0.45
Polr1aO35134 Gm8255-201ENSMUST00000218693 305 ntBASIC17.86■□□□□ 0.45
Polr1aO35134 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Polr1aO35134 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr1aO35134 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr1aO35134 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr1aO35134 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr1aO35134 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Polr1aO35134 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr1aO35134 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr1aO35134 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr1aO35134 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Polr1aO35134 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC17.86■□□□□ 0.45
Polr1aO35134 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Polr1aO35134 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr1aO35134 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC17.86■□□□□ 0.45
Polr1aO35134 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC17.86■□□□□ 0.45
Polr1aO35134 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC17.86■□□□□ 0.45
Polr1aO35134 Gm4753-201ENSMUST00000188327 1255 ntBASIC17.86■□□□□ 0.45
Polr1aO35134 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC17.86■□□□□ 0.45
Polr1aO35134 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Polr1aO35134 Gm5267-201ENSMUST00000191574 1045 ntBASIC17.86■□□□□ 0.45
Polr1aO35134 Gm5178-201ENSMUST00000219380 898 ntBASIC17.86■□□□□ 0.45
Polr1aO35134 CT025618.1-203ENSMUST00000227008 589 ntBASIC17.86■□□□□ 0.45
Polr1aO35134 CT030652.1-201ENSMUST00000227377 1235 ntBASIC17.86■□□□□ 0.45
Polr1aO35134 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr1aO35134 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Polr1aO35134 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Polr1aO35134 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Gm18210-201ENSMUST00000209001 1524 ntBASIC17.85■□□□□ 0.45
Polr1aO35134 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Polr1aO35134 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Polr1aO35134 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Polr1aO35134 Gm16165-201ENSMUST00000160140 795 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms