Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hps1O08983 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hps1O08983 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.06□□□□□ -0.64
Hps1O08983 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Hps1O08983 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.06□□□□□ -0.64
Hps1O08983 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.06□□□□□ -0.64
Hps1O08983 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.06□□□□□ -0.64
Hps1O08983 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Hps1O08983 Gm12176-201ENSMUST00000121420 875 ntBASIC11.06□□□□□ -0.64
Hps1O08983 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.06□□□□□ -0.64
Hps1O08983 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.06□□□□□ -0.64
Hps1O08983 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.06□□□□□ -0.64
Hps1O08983 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.06□□□□□ -0.64
Hps1O08983 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.06□□□□□ -0.64
Hps1O08983 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.06□□□□□ -0.64
Hps1O08983 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.06□□□□□ -0.64
Hps1O08983 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.06□□□□□ -0.64
Hps1O08983 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Hps1O08983 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Hps1O08983 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hps1O08983 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Hps1O08983 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
Hps1O08983 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.06□□□□□ -0.64
Hps1O08983 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hps1O08983 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hps1O08983 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Hps1O08983 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hps1O08983 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Hps1O08983 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hps1O08983 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Gm24231-201ENSMUST00000104315 133 ntBASIC11.05□□□□□ -0.64
Hps1O08983 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.05□□□□□ -0.64
Hps1O08983 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.05□□□□□ -0.64
Hps1O08983 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.05□□□□□ -0.64
Hps1O08983 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.05□□□□□ -0.64
Hps1O08983 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.05□□□□□ -0.64
Hps1O08983 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.05□□□□□ -0.64
Hps1O08983 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.05□□□□□ -0.64
Hps1O08983 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.05□□□□□ -0.64
Hps1O08983 Gm16296-201ENSMUST00000159905 325 ntBASIC11.05□□□□□ -0.64
Hps1O08983 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.05□□□□□ -0.64
Hps1O08983 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.05□□□□□ -0.64
Hps1O08983 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.05□□□□□ -0.64
Hps1O08983 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.05□□□□□ -0.64
Hps1O08983 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.05□□□□□ -0.64
Hps1O08983 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.05□□□□□ -0.64
Hps1O08983 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.05□□□□□ -0.64
Hps1O08983 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.05□□□□□ -0.64
Hps1O08983 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Hps1O08983 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hps1O08983 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Hps1O08983 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Hps1O08983 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms