Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.58□□□□□ -0.72
Raet1cO08604 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Raet1cO08604 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Raet1cO08604 Gm11511-201ENSMUST00000118146 540 ntBASIC10.58□□□□□ -0.72
Raet1cO08604 Gm17376-201ENSMUST00000166016 84 ntBASIC10.58□□□□□ -0.72
Raet1cO08604 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC10.58□□□□□ -0.72
Raet1cO08604 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.58□□□□□ -0.72
Raet1cO08604 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.58□□□□□ -0.72
Raet1cO08604 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Raet1cO08604 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Raet1cO08604 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.58□□□□□ -0.72
Raet1cO08604 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Raet1cO08604 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.58□□□□□ -0.72
Raet1cO08604 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.58□□□□□ -0.72
Raet1cO08604 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Raet1cO08604 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Raet1cO08604 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.58□□□□□ -0.72
Raet1cO08604 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Raet1cO08604 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Raet1cO08604 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Raet1cO08604 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Raet1cO08604 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Raet1cO08604 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Raet1cO08604 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Raet1cO08604 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Raet1cO08604 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Raet1cO08604 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Raet1cO08604 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Raet1cO08604 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Raet1cO08604 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.57□□□□□ -0.72
Raet1cO08604 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC10.57□□□□□ -0.72
Raet1cO08604 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Raet1cO08604 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.57□□□□□ -0.72
Raet1cO08604 Gm13665-201ENSMUST00000120830 528 ntBASIC10.57□□□□□ -0.72
Raet1cO08604 Gm14441-201ENSMUST00000121960 540 ntBASIC10.57□□□□□ -0.72
Raet1cO08604 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.57□□□□□ -0.72
Raet1cO08604 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Gm8956-201ENSMUST00000203939 825 ntBASIC10.57□□□□□ -0.72
Raet1cO08604 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.57□□□□□ -0.72
Raet1cO08604 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.57□□□□□ -0.72
Raet1cO08604 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.57□□□□□ -0.72
Raet1cO08604 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.57□□□□□ -0.72
Raet1cO08604 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Raet1cO08604 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Raet1cO08604 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.57□□□□□ -0.72
Raet1cO08604 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Raet1cO08604 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.56□□□□□ -0.72
Raet1cO08604 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Raet1cO08604 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Raet1cO08604 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Raet1cO08604 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Raet1cO08604 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Raet1cO08604 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.56□□□□□ -0.72
Raet1cO08604 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Raet1cO08604 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Raet1cO08604 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Raet1cO08604 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.56□□□□□ -0.72
Raet1cO08604 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Raet1cO08604 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Raet1cO08604 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Raet1cO08604 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.56□□□□□ -0.72
Raet1cO08604 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Raet1cO08604 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Raet1cO08604 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.56□□□□□ -0.72
Raet1cO08604 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.56□□□□□ -0.72
Raet1cO08604 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Raet1cO08604 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.56□□□□□ -0.72
Raet1cO08604 Gm25668-201ENSMUST00000157700 129 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms