Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.12□□□□□ -0.95
MsmbO08540 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.12□□□□□ -0.95
MsmbO08540 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC9.12□□□□□ -0.95
MsmbO08540 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.12□□□□□ -0.95
MsmbO08540 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC9.12□□□□□ -0.95
MsmbO08540 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
MsmbO08540 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.12□□□□□ -0.95
MsmbO08540 Gm23596-201ENSMUST00000104304 132 ntBASIC9.12□□□□□ -0.95
MsmbO08540 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.12□□□□□ -0.95
MsmbO08540 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC9.12□□□□□ -0.95
MsmbO08540 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.12□□□□□ -0.95
MsmbO08540 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.12□□□□□ -0.95
MsmbO08540 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.12□□□□□ -0.95
MsmbO08540 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.12□□□□□ -0.95
MsmbO08540 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.12□□□□□ -0.95
MsmbO08540 Gm18038-201ENSMUST00000197900 485 ntBASIC9.12□□□□□ -0.95
MsmbO08540 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Gm9797-202ENSMUST00000218003 294 ntBASIC9.12□□□□□ -0.95
MsmbO08540 Gm807-202ENSMUST00000224929 408 ntBASIC9.12□□□□□ -0.95
MsmbO08540 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.12□□□□□ -0.95
MsmbO08540 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Gm26448-201ENSMUST00000082446 203 ntBASIC9.12□□□□□ -0.95
MsmbO08540 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
MsmbO08540 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
MsmbO08540 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
MsmbO08540 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.11□□□□□ -0.95
MsmbO08540 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Gm7104-201ENSMUST00000179741 2532 ntBASIC9.11□□□□□ -0.95
MsmbO08540 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.11□□□□□ -0.95
MsmbO08540 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
MsmbO08540 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
MsmbO08540 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9.11□□□□□ -0.95
MsmbO08540 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
MsmbO08540 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
MsmbO08540 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
MsmbO08540 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.11□□□□□ -0.95
MsmbO08540 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
MsmbO08540 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Gm1995-201ENSMUST00000220838 2602 ntBASIC9.11□□□□□ -0.95
MsmbO08540 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
MsmbO08540 Gm26286-201ENSMUST00000104166 134 ntBASIC9.11□□□□□ -0.95
MsmbO08540 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
MsmbO08540 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Gm11511-201ENSMUST00000118146 540 ntBASIC9.11□□□□□ -0.95
MsmbO08540 Gm12266-201ENSMUST00000120311 962 ntBASIC9.11□□□□□ -0.95
MsmbO08540 Gm15610-201ENSMUST00000120584 195 ntBASIC9.11□□□□□ -0.95
MsmbO08540 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.11□□□□□ -0.95
MsmbO08540 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.11□□□□□ -0.95
MsmbO08540 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
MsmbO08540 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
MsmbO08540 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
MsmbO08540 Mir7677-201ENSMUST00000184226 67 ntBASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms