Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.78□□□□□ -0.68
Shisa8J3QNX5 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Shisa8J3QNX5 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Shisa8J3QNX5 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Shisa8J3QNX5 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Shisa8J3QNX5 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Shisa8J3QNX5 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Shisa8J3QNX5 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Shisa8J3QNX5 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Shisa8J3QNX5 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Shisa8J3QNX5 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Shisa8J3QNX5 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Shisa8J3QNX5 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Shisa8J3QNX5 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Gm15806-201ENSMUST00000120696 955 ntBASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Gm9002-201ENSMUST00000178437 499 ntBASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Gm37201-201ENSMUST00000191845 523 ntBASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.77□□□□□ -0.69
Shisa8J3QNX5 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.77□□□□□ -0.69
Shisa8J3QNX5 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.77□□□□□ -0.69
Shisa8J3QNX5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Shisa8J3QNX5 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.76□□□□□ -0.69
Shisa8J3QNX5 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Gm27023-201ENSMUST00000182372 285 ntBASIC10.76□□□□□ -0.69
Shisa8J3QNX5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Gm43002-201ENSMUST00000200310 155 ntBASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Shisa8J3QNX5 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms