Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Gm2429-201ENSMUST00000194635 586 ntBASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Gm44726-201ENSMUST00000203427 217 ntBASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Gm18460-201ENSMUST00000208088 464 ntBASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Gm17827-201ENSMUST00000211825 742 ntBASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 AC134439.2-201ENSMUST00000221950 467 ntBASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 CT030653.1-201ENSMUST00000224382 1279 ntBASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 AC154361.2-201ENSMUST00000224747 943 ntBASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 AC107711.1-201ENSMUST00000227258 1295 ntBASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 AC163295.1-201ENSMUST00000227840 314 ntBASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Tmem14a-201ENSMUST00000027064 1261 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nkx1-1G3UXB3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Gm22133-201ENSMUST00000102082 109 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Gm15090-201ENSMUST00000118787 1196 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Gm7722-201ENSMUST00000120646 741 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Gm11988-201ENSMUST00000122321 1069 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Gm15089-201ENSMUST00000122332 1196 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Gm9507-202ENSMUST00000180157 654 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Pdc-204ENSMUST00000191228 1235 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Gm38214-201ENSMUST00000192581 988 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Gm37993-201ENSMUST00000195301 988 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Gm43928-201ENSMUST00000203737 409 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Gm44980-201ENSMUST00000205826 314 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Gm3619-201ENSMUST00000219947 775 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 AC116656.1-201ENSMUST00000227040 755 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Gm24268-201ENSMUST00000082990 110 ntBASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Btg4-201ENSMUST00000114431 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC14.43□□□□□ -0.1
Nkx1-1G3UXB3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-1G3UXB3 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-1G3UXB3 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-1G3UXB3 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-1G3UXB3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-1G3UXB3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx1-1G3UXB3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx1-1G3UXB3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms