Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Pcdh17E9PXF0 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Gm15131-201ENSMUST00000119124 595 ntBASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Gm5705-201ENSMUST00000066241 711 ntBASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh17E9PXF0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Gm5419-201ENSMUST00000119301 527 ntBASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Gm28686-201ENSMUST00000187404 609 ntBASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Gm9797-202ENSMUST00000218003 294 ntBASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh17E9PXF0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms