Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 Gm38034-201ENSMUST00000193915 2069 ntBASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Col6a3E9PWQ3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Mir7051-201ENSMUST00000184167 73 ntBASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gm17931-201ENSMUST00000208132 634 ntBASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 AC156561.1-201ENSMUST00000224774 233 ntBASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gm32856-202ENSMUST00000212180 1134 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gnpnat1-202ENSMUST00000226276 710 ntBASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gm12481-201ENSMUST00000102482 297 ntBASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gm25288-201ENSMUST00000122800 265 ntBASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gm5526-201ENSMUST00000153604 423 ntBASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gm37012-201ENSMUST00000194991 1078 ntBASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gm44498-201ENSMUST00000199509 111 ntBASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col6a3E9PWQ3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Gm28671-201ENSMUST00000187036 692 ntBASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 AC134860.2-201ENSMUST00000225277 1036 ntBASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Gm5424-201ENSMUST00000053865 1240 ntBASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Gm18014-201ENSMUST00000183369 817 ntBASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Gm38349-201ENSMUST00000195732 462 ntBASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Gm43664-201ENSMUST00000196038 734 ntBASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Gm21149-201ENSMUST00000197995 1212 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Col6a3E9PWQ3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm23916-201ENSMUST00000158484 399 ntBASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm37723-201ENSMUST00000194480 565 ntBASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm37486-201ENSMUST00000195663 405 ntBASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Gm42441-201ENSMUST00000199778 748 ntBASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col6a3E9PWQ3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms