Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.63□□□□□ -0.71
Shank1D3YZU1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Gm14213-201ENSMUST00000119778 768 ntBASIC10.63□□□□□ -0.71
Shank1D3YZU1 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.63□□□□□ -0.71
Shank1D3YZU1 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Gm43912-201ENSMUST00000204352 538 ntBASIC10.63□□□□□ -0.71
Shank1D3YZU1 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.63□□□□□ -0.71
Shank1D3YZU1 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.63□□□□□ -0.71
Shank1D3YZU1 Gm16380-201ENSMUST00000077997 478 ntBASIC10.63□□□□□ -0.71
Shank1D3YZU1 Gm5451-201ENSMUST00000080545 579 ntBASIC10.63□□□□□ -0.71
Shank1D3YZU1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.63□□□□□ -0.71
Shank1D3YZU1 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Shank1D3YZU1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.62□□□□□ -0.71
Shank1D3YZU1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.62□□□□□ -0.71
Shank1D3YZU1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.62□□□□□ -0.71
Shank1D3YZU1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Gm12783-201ENSMUST00000121425 397 ntBASIC10.62□□□□□ -0.71
Shank1D3YZU1 Gm5257-201ENSMUST00000121823 790 ntBASIC10.62□□□□□ -0.71
Shank1D3YZU1 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Gm18968-201ENSMUST00000221319 862 ntBASIC10.62□□□□□ -0.71
Shank1D3YZU1 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.62□□□□□ -0.71
Shank1D3YZU1 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Gm42941-201ENSMUST00000200347 1321 ntBASIC10.62□□□□□ -0.71
Shank1D3YZU1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shank1D3YZU1 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 126.3 ms