Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn7aB1AYL1 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Scn7aB1AYL1 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn7aB1AYL1 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC14.93□□□□□ -0.02
Scn7aB1AYL1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn7aB1AYL1 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Scn7aB1AYL1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Gm37852-201ENSMUST00000193027 350 ntBASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Gm20781-201ENSMUST00000193154 693 ntBASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Gm21736-201ENSMUST00000195399 693 ntBASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Gm43564-201ENSMUST00000196185 211 ntBASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Gm9102-201ENSMUST00000219250 465 ntBASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 n-R5s71-201ENSMUST00000093668 119 ntBASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Gm43152-201ENSMUST00000202495 1638 ntBASIC14.92□□□□□ -0.02
Scn7aB1AYL1 AC174797.1-201ENSMUST00000224339 1649 ntBASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Scn7aB1AYL1 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Gm22846-201ENSMUST00000157706 270 ntBASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Gm25830-201ENSMUST00000158923 132 ntBASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Gm24328-201ENSMUST00000175104 67 ntBASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Gm9507-202ENSMUST00000180157 654 ntBASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Gm9162-201ENSMUST00000182081 991 ntBASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Gm18499-201ENSMUST00000220808 1021 ntBASIC14.91□□□□□ -0.02
Scn7aB1AYL1 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Gm25580-201ENSMUST00000083409 327 ntBASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Gm42815-201ENSMUST00000198787 1470 ntBASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Gm37014-201ENSMUST00000194723 2253 ntBASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.91□□□□□ -0.02
Scn7aB1AYL1 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms