Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Gm37967-201ENSMUST00000195634 2665 ntBASIC2.59□□□□□ -2
Gm4559A4IF42 Gm44937-201ENSMUST00000207705 2691 ntBASIC2.59□□□□□ -2
Gm4559A4IF42 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Gm4559A4IF42 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC2.59□□□□□ -2
Gm4559A4IF42 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC2.59□□□□□ -2
Gm4559A4IF42 Gm21051-201ENSMUST00000221757 1688 ntBASIC2.59□□□□□ -2
Gm4559A4IF42 Gm44639-201ENSMUST00000205859 3009 ntBASIC2.59□□□□□ -2
Gm4559A4IF42 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Gm4559A4IF42 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC2.59□□□□□ -2
Gm4559A4IF42 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
Gm4559A4IF42 Gm3623-201ENSMUST00000173643 2747 ntBASIC2.59□□□□□ -2
Gm4559A4IF42 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC2.59□□□□□ -2
Gm4559A4IF42 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Gm4559A4IF42 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Gm4559A4IF42 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC2.59□□□□□ -2
Gm4559A4IF42 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -2
Gm4559A4IF42 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Gm4559A4IF42 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
Gm4559A4IF42 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC2.59□□□□□ -2
Gm4559A4IF42 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Gm4559A4IF42 CT025577.1-201ENSMUST00000220862 2846 ntBASIC2.59□□□□□ -2
Gm4559A4IF42 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.59□□□□□ -2
Gm4559A4IF42 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Gm4559A4IF42 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
Gm4559A4IF42 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Gm4559A4IF42 AC121844.3-201ENSMUST00000219124 1785 ntBASIC2.59□□□□□ -2
Gm4559A4IF42 Wdr5b-201ENSMUST00000042203 1784 ntAPPRIS P1 BASIC2.59□□□□□ -2
Gm4559A4IF42 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC2.59□□□□□ -2
Gm4559A4IF42 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC2.59□□□□□ -2
Gm4559A4IF42 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC2.59□□□□□ -2
Gm4559A4IF42 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC2.59□□□□□ -2
Gm4559A4IF42 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Gm4559A4IF42 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Gm4559A4IF42 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
Gm4559A4IF42 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC2.59□□□□□ -2
Gm4559A4IF42 Gm45149-201ENSMUST00000206459 2172 ntBASIC2.59□□□□□ -2
Gm4559A4IF42 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Gm4559A4IF42 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Chrdl2-202ENSMUST00000107084 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 Ucn3-201ENSMUST00000058610 1478 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 AC153504.1-201ENSMUST00000218379 2290 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm5310-201ENSMUST00000197861 1511 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Cabs1-201ENSMUST00000008051 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm5347-201ENSMUST00000210542 2327 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 CT009757.3-201ENSMUST00000223367 2320 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Spata17-205ENSMUST00000183819 1552 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 P2rx2-206ENSMUST00000200214 1568 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm37482-201ENSMUST00000194899 2791 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm34069-201ENSMUST00000214060 2441 ntTSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 AC159195.1-201ENSMUST00000225867 2086 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm5472-201ENSMUST00000178604 1678 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
Gm4559A4IF42 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm14803-201ENSMUST00000117163 361 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms