Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm14633-201ENSMUST00000121152 470 ntBASIC9.52□□□□□ -0.89
Chd6A3KFM7 Gm5270-201ENSMUST00000121506 1002 ntBASIC9.52□□□□□ -0.89
Chd6A3KFM7 Gm25591-201ENSMUST00000177317 94 ntBASIC9.52□□□□□ -0.89
Chd6A3KFM7 Gm9771-201ENSMUST00000198267 1137 ntBASIC9.52□□□□□ -0.89
Chd6A3KFM7 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Gm18164-201ENSMUST00000213769 927 ntBASIC9.52□□□□□ -0.89
Chd6A3KFM7 Gm18166-201ENSMUST00000215557 927 ntBASIC9.52□□□□□ -0.89
Chd6A3KFM7 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC9.52□□□□□ -0.89
Chd6A3KFM7 AC153153.1-201ENSMUST00000225803 793 ntBASIC9.52□□□□□ -0.89
Chd6A3KFM7 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Gm16477-201ENSMUST00000085365 801 ntBASIC9.52□□□□□ -0.89
Chd6A3KFM7 Gm17415-201ENSMUST00000096427 789 ntBASIC9.52□□□□□ -0.89
Chd6A3KFM7 Gm8618-201ENSMUST00000097570 432 ntBASIC9.52□□□□□ -0.89
Chd6A3KFM7 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Chd6A3KFM7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm10729-202ENSMUST00000193403 1375 ntBASIC9.51□□□□□ -0.89
Chd6A3KFM7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm6881-201ENSMUST00000121811 833 ntBASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm23555-201ENSMUST00000157815 135 ntBASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Atad3aos-204ENSMUST00000174185 482 ntTSL 3 BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm24466-201ENSMUST00000179978 109 ntBASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm5194-201ENSMUST00000221457 742 ntBASIC9.51□□□□□ -0.89
Chd6A3KFM7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm28323-201ENSMUST00000186817 2499 ntBASIC9.51□□□□□ -0.89
Chd6A3KFM7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Fam220-ps-201ENSMUST00000116535 783 ntBASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm15720-201ENSMUST00000117133 282 ntBASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm15570-201ENSMUST00000122093 625 ntBASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.51□□□□□ -0.89
Chd6A3KFM7 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Tspy-ps-203ENSMUST00000186546 989 ntBASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm43163-201ENSMUST00000196571 442 ntBASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm8956-201ENSMUST00000203939 825 ntBASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm17825-201ENSMUST00000206836 794 ntBASIC9.51□□□□□ -0.89
Chd6A3KFM7 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.51□□□□□ -0.89
Chd6A3KFM7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Chd6A3KFM7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm9372-201ENSMUST00000168454 430 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm37819-201ENSMUST00000194626 1065 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm38301-201ENSMUST00000195573 543 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 Gm31274-201ENSMUST00000197356 229 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Chd6A3KFM7 Zkscan7-205ENSMUST00000216462 990 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.5□□□□□ -0.89
Chd6A3KFM7 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms