Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Gm15198-201ENSMUST00000117283 177 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Gm44967-201ENSMUST00000207047 631 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Gm44651-201ENSMUST00000207343 372 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Gm8420-201ENSMUST00000097103 598 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tubb1A2AQ07 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tubb1A2AQ07 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tubb1A2AQ07 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tubb1A2AQ07 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Tubb1A2AQ07 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tubb1A2AQ07 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms