Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ubr4A2AN08 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ubr4A2AN08 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ubr4A2AN08 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ubr4A2AN08 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ubr4A2AN08 Nt5c1b-203ENSMUST00000143739 1570 ntTSL 2 BASIC6.06□□□□□ -1.44
Ubr4A2AN08 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Ubr4A2AN08 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
Ubr4A2AN08 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Ubr4A2AN08 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC6.06□□□□□ -1.44
Ubr4A2AN08 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm44260-201ENSMUST00000204946 2094 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm4252-201ENSMUST00000174823 313 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm44767-201ENSMUST00000206634 469 ntTSL 5 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm3828-201ENSMUST00000121817 257 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Mir7051-201ENSMUST00000184167 73 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm44640-201ENSMUST00000206894 247 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm20633-201ENSMUST00000176742 2831 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Rhox4f-201ENSMUST00000115170 948 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm11771-201ENSMUST00000118124 732 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm13688-201ENSMUST00000121557 608 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm12745-201ENSMUST00000121767 214 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm19927-201ENSMUST00000185792 781 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm2021-201ENSMUST00000190623 464 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm2553-201ENSMUST00000215986 605 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm25483-201ENSMUST00000083224 227 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Dcstamp-205ENSMUST00000228556 1684 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm5510-201ENSMUST00000117826 486 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm11203-201ENSMUST00000122169 741 ntBASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Ubr4A2AN08 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm15702-201ENSMUST00000119680 444 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm16199-201ENSMUST00000160032 288 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm27221-201ENSMUST00000183485 961 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm27176-201ENSMUST00000183642 961 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Gm32842-201ENSMUST00000212653 738 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 AC134869.2-201ENSMUST00000225788 421 ntBASIC6.04□□□□□ -1.44
Ubr4A2AN08 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Ubr4A2AN08 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms