Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gm12203-201ENSMUST00000118235 598 ntBASIC9.12□□□□□ -0.95
PdfS4R2K0 Gm12209-201ENSMUST00000120089 596 ntBASIC9.12□□□□□ -0.95
PdfS4R2K0 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.12□□□□□ -0.95
PdfS4R2K0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC9.12□□□□□ -0.95
PdfS4R2K0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC9.12□□□□□ -0.95
PdfS4R2K0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC9.12□□□□□ -0.95
PdfS4R2K0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.12□□□□□ -0.95
PdfS4R2K0 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC9.12□□□□□ -0.95
PdfS4R2K0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC9.12□□□□□ -0.95
PdfS4R2K0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC9.12□□□□□ -0.95
PdfS4R2K0 Gm44826-201ENSMUST00000207648 2332 ntBASIC9.12□□□□□ -0.95
PdfS4R2K0 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
PdfS4R2K0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC9.12□□□□□ -0.95
PdfS4R2K0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
PdfS4R2K0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.12□□□□□ -0.95
PdfS4R2K0 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
PdfS4R2K0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
PdfS4R2K0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
PdfS4R2K0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC9.12□□□□□ -0.95
PdfS4R2K0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
PdfS4R2K0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC9.11□□□□□ -0.95
PdfS4R2K0 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
PdfS4R2K0 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.11□□□□□ -0.95
PdfS4R2K0 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.11□□□□□ -0.95
PdfS4R2K0 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.11□□□□□ -0.95
PdfS4R2K0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Gm17420-201ENSMUST00000164753 153 ntBASIC9.11□□□□□ -0.95
PdfS4R2K0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Gm5370-201ENSMUST00000187187 574 ntBASIC9.11□□□□□ -0.95
PdfS4R2K0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Gm37424-201ENSMUST00000191727 561 ntBASIC9.11□□□□□ -0.95
PdfS4R2K0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Gm43438-201ENSMUST00000198133 379 ntBASIC9.11□□□□□ -0.95
PdfS4R2K0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
PdfS4R2K0 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
PdfS4R2K0 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
PdfS4R2K0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC9.1□□□□□ -0.95
PdfS4R2K0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PdfS4R2K0 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.1□□□□□ -0.95
PdfS4R2K0 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PdfS4R2K0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
PdfS4R2K0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
PdfS4R2K0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms