Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Gm5187-201ENSMUST00000117317 991 ntBASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Gm14247-201ENSMUST00000120950 237 ntBASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Gm14832-201ENSMUST00000121289 322 ntBASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Gm37489-201ENSMUST00000191883 159 ntBASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H2afb3S4R1G7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.68□□□□□ -0.7
H2afb3S4R1G7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Gm26956-201ENSMUST00000182176 986 ntBASIC10.68□□□□□ -0.7
H2afb3S4R1G7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Gm38002-201ENSMUST00000193255 180 ntBASIC10.68□□□□□ -0.7
H2afb3S4R1G7 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Gm45880-201ENSMUST00000213041 853 ntBASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Morn2-202ENSMUST00000227729 656 ntBASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
H2afb3S4R1G7 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms