Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim3Q9R1R2 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Gm6963-201ENSMUST00000147879 379 ntBASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Gm5070-201ENSMUST00000177599 862 ntBASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Gm42599-201ENSMUST00000201308 469 ntBASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.19□□□□□ -0.62
Trim3Q9R1R2 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.19□□□□□ -0.62
Trim3Q9R1R2 BC043934-202ENSMUST00000185694 2356 ntBASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trim3Q9R1R2 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Gm24934-201ENSMUST00000103764 111 ntBASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Gm14644-201ENSMUST00000116671 647 ntBASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms