Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Gm9723-201ENSMUST00000192100 457 ntBASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf40aQ9R1C7 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Gm14247-201ENSMUST00000120950 237 ntBASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Gm26361-201ENSMUST00000158868 186 ntBASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Gm5244-202ENSMUST00000189517 743 ntBASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 AC107452.3-201ENSMUST00000228807 1308 ntBASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf40aQ9R1C7 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Prpf40aQ9R1C7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms