Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh17Q9R100 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh17Q9R100 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh17Q9R100 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh17Q9R100 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh17Q9R100 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh17Q9R100 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.53□□□□□ -0.56
Cdh17Q9R100 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
Cdh17Q9R100 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh17Q9R100 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.53□□□□□ -0.56
Cdh17Q9R100 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cdh17Q9R100 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh17Q9R100 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.53□□□□□ -0.56
Cdh17Q9R100 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh17Q9R100 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh17Q9R100 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.53□□□□□ -0.56
Cdh17Q9R100 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh17Q9R100 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh17Q9R100 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh17Q9R100 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.53□□□□□ -0.56
Cdh17Q9R100 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh17Q9R100 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Cdh17Q9R100 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh17Q9R100 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh17Q9R100 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh17Q9R100 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh17Q9R100 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh17Q9R100 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Cdh17Q9R100 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh17Q9R100 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh17Q9R100 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Gm12742-201ENSMUST00000117326 410 ntBASIC11.52□□□□□ -0.57
Cdh17Q9R100 Gm15004-201ENSMUST00000119192 630 ntBASIC11.52□□□□□ -0.57
Cdh17Q9R100 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cdh17Q9R100 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cdh17Q9R100 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.52□□□□□ -0.57
Cdh17Q9R100 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cdh17Q9R100 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdh17Q9R100 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.51□□□□□ -0.57
Cdh17Q9R100 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Gm11439-201ENSMUST00000118598 409 ntBASIC11.51□□□□□ -0.57
Cdh17Q9R100 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Gm27046-201ENSMUST00000182160 463 ntBASIC11.51□□□□□ -0.57
Cdh17Q9R100 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdh17Q9R100 Gm43962-201ENSMUST00000203898 190 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms