Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.71□□□□□ -0.69
Sec61a2Q9JLR1 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sec61a2Q9JLR1 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sec61a2Q9JLR1 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.7
Sec61a2Q9JLR1 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sec61a2Q9JLR1 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.71□□□□□ -0.7
Sec61a2Q9JLR1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Gm4857-201ENSMUST00000192718 785 ntBASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Gm18711-201ENSMUST00000199341 750 ntBASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sec61a2Q9JLR1 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Gm11930-201ENSMUST00000117788 190 ntBASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Gm15808-201ENSMUST00000119046 604 ntBASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Gm27046-201ENSMUST00000182160 463 ntBASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Gm3096-201ENSMUST00000185770 364 ntBASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.69□□□□□ -0.7
Sec61a2Q9JLR1 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms