Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Matn2-206ENSMUST00000228570 2798 ntBASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nkx2-4Q9EQM3 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Gm9673-201ENSMUST00000119287 781 ntBASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Gm12791-201ENSMUST00000120788 655 ntBASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Gm25830-201ENSMUST00000158923 132 ntBASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nkx2-4Q9EQM3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.15□□□□□ -0.47
Nkx2-4Q9EQM3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Nkx2-4Q9EQM3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nkx2-4Q9EQM3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm11957-201ENSMUST00000118304 779 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm13422-201ENSMUST00000118834 504 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm23400-201ENSMUST00000174994 102 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm26463-201ENSMUST00000175065 101 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm24332-201ENSMUST00000175102 102 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm25959-201ENSMUST00000175112 102 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm22475-201ENSMUST00000175169 102 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm22903-201ENSMUST00000175193 102 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm25070-201ENSMUST00000175237 102 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm24159-201ENSMUST00000175264 102 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm25299-201ENSMUST00000175283 102 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm23798-201ENSMUST00000175560 102 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm23802-201ENSMUST00000175565 102 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm25708-201ENSMUST00000177687 102 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm24370-201ENSMUST00000178007 102 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm23049-201ENSMUST00000178068 102 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm28019-201ENSMUST00000178138 101 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm25571-201ENSMUST00000178322 102 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm25355-201ENSMUST00000178456 101 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm24975-201ENSMUST00000178492 101 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm23189-201ENSMUST00000178954 102 ntBASIC12.14□□□□□ -0.47
Nkx2-4Q9EQM3 Gm25100-201ENSMUST00000179750 101 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms