Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Mir877-201ENSMUST00000104738 85 ntBASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Gm11960-201ENSMUST00000122068 925 ntBASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rnf6Q9DBU5 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Gm23949-201ENSMUST00000104027 127 ntBASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Mir6420-201ENSMUST00000185032 102 ntBASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Gm38314-201ENSMUST00000195709 625 ntBASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Gm9797-202ENSMUST00000218003 294 ntBASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Rnf6Q9DBU5 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.71□□□□□ -0.38
Rnf6Q9DBU5 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf6Q9DBU5 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf6Q9DBU5 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf6Q9DBU5 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf6Q9DBU5 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf6Q9DBU5 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf6Q9DBU5 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf6Q9DBU5 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf6Q9DBU5 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Rnf6Q9DBU5 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Gm11509-201ENSMUST00000117358 325 ntBASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Gm6450-201ENSMUST00000200896 574 ntBASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Rps4l-202ENSMUST00000204242 789 ntBASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Rnf6Q9DBU5 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Rnf6Q9DBU5 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms