Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Rrp8Q9DB85 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Gm22711-201ENSMUST00000116890 133 ntBASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Gm11783-201ENSMUST00000119549 885 ntBASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Gm28388-201ENSMUST00000186262 437 ntBASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rrp8Q9DB85 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.62□□□□□ -0.55
Rrp8Q9DB85 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Gm14942-201ENSMUST00000119642 336 ntBASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Gm13937-201ENSMUST00000121000 988 ntBASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Gm25951-201ENSMUST00000175330 64 ntBASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Gm18367-201ENSMUST00000176139 600 ntBASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.62□□□□□ -0.55
Rrp8Q9DB85 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Gm38151-201ENSMUST00000195085 289 ntBASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Gm45120-201ENSMUST00000208880 408 ntBASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rrp8Q9DB85 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rrp8Q9DB85 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms