Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cfap53Q9D439 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cfap53Q9D439 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cfap53Q9D439 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Dopey2-207ENSMUST00000227156 7340 ntBASIC13.03□□□□□ -0.32
Cfap53Q9D439 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.03□□□□□ -0.32
Cfap53Q9D439 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.03□□□□□ -0.32
Cfap53Q9D439 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Gm17376-201ENSMUST00000166016 84 ntBASIC13.03□□□□□ -0.32
Cfap53Q9D439 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Gm8956-201ENSMUST00000203939 825 ntBASIC13.03□□□□□ -0.32
Cfap53Q9D439 Gm6082-201ENSMUST00000215204 454 ntBASIC13.03□□□□□ -0.32
Cfap53Q9D439 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Gm5455-201ENSMUST00000058710 715 ntBASIC13.03□□□□□ -0.32
Cfap53Q9D439 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.03□□□□□ -0.32
Cfap53Q9D439 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cfap53Q9D439 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cfap53Q9D439 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.03□□□□□ -0.32
Cfap53Q9D439 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.02□□□□□ -0.32
Cfap53Q9D439 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cfap53Q9D439 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cfap53Q9D439 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cfap53Q9D439 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.02□□□□□ -0.32
Cfap53Q9D439 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.32
Cfap53Q9D439 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cfap53Q9D439 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cfap53Q9D439 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cfap53Q9D439 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cfap53Q9D439 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.02□□□□□ -0.32
Cfap53Q9D439 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cfap53Q9D439 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Gm11511-201ENSMUST00000118146 540 ntBASIC13.02□□□□□ -0.33
Cfap53Q9D439 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.02□□□□□ -0.33
Cfap53Q9D439 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Gm26361-201ENSMUST00000158868 186 ntBASIC13.02□□□□□ -0.33
Cfap53Q9D439 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Gm25890-201ENSMUST00000177643 165 ntBASIC13.02□□□□□ -0.33
Cfap53Q9D439 Gm25700-201ENSMUST00000177693 110 ntBASIC13.02□□□□□ -0.33
Cfap53Q9D439 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.02□□□□□ -0.33
Cfap53Q9D439 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.02□□□□□ -0.33
Cfap53Q9D439 Gm22614-201ENSMUST00000178300 165 ntBASIC13.02□□□□□ -0.33
Cfap53Q9D439 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.02□□□□□ -0.33
Cfap53Q9D439 Gm18893-201ENSMUST00000198416 943 ntBASIC13.02□□□□□ -0.33
Cfap53Q9D439 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Gm22042-201ENSMUST00000082989 165 ntBASIC13.02□□□□□ -0.33
Cfap53Q9D439 Gm26110-201ENSMUST00000083971 165 ntBASIC13.02□□□□□ -0.33
Cfap53Q9D439 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cfap53Q9D439 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cfap53Q9D439 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.01□□□□□ -0.33
Cfap53Q9D439 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms