Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Gm7722-201ENSMUST00000120646 741 ntBASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Gm42627-201ENSMUST00000197347 224 ntBASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.75□□□□□ -0.53
Ssu72Q9CY97 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.74□□□□□ -0.53
Ssu72Q9CY97 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ssu72Q9CY97 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.73□□□□□ -0.53
Ssu72Q9CY97 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms