Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm43930-201ENSMUST00000203868 845 ntBASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Gm5455-201ENSMUST00000058710 715 ntBASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Rgr-203ENSMUST00000225070 4704 ntBASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.51□□□□□ -0.25
Trim11Q99PQ2 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Gm11700-201ENSMUST00000119409 403 ntBASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Gm44651-201ENSMUST00000207343 372 ntBASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.51□□□□□ -0.25
Trim11Q99PQ2 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Gm9192-201ENSMUST00000183221 985 ntBASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Gm44364-201ENSMUST00000198368 141 ntBASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Gm43962-201ENSMUST00000203898 190 ntBASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim11Q99PQ2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms