Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm22042-201ENSMUST00000082989 165 ntBASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm26110-201ENSMUST00000083971 165 ntBASIC11.88□□□□□ -0.51
Trim33Q99PP7 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.88□□□□□ -0.51
Trim33Q99PP7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Trim33Q99PP7 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trim33Q99PP7 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Trim33Q99PP7 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.87□□□□□ -0.51
Trim33Q99PP7 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Gm45501-201ENSMUST00000211468 2526 ntBASIC11.87□□□□□ -0.51
Trim33Q99PP7 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.87□□□□□ -0.51
Trim33Q99PP7 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Gm13665-201ENSMUST00000120830 528 ntBASIC11.87□□□□□ -0.51
Trim33Q99PP7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.87□□□□□ -0.51
Trim33Q99PP7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Rprl1-201ENSMUST00000158050 327 ntBASIC11.87□□□□□ -0.51
Trim33Q99PP7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Rprl1-202ENSMUST00000198476 238 ntBASIC11.87□□□□□ -0.51
Trim33Q99PP7 Gm44967-201ENSMUST00000207047 631 ntBASIC11.87□□□□□ -0.51
Trim33Q99PP7 Gm45598-202ENSMUST00000210719 986 ntBASIC11.87□□□□□ -0.51
Trim33Q99PP7 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.87□□□□□ -0.51
Trim33Q99PP7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.87□□□□□ -0.51
Trim33Q99PP7 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim33Q99PP7 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.86□□□□□ -0.51
Trim33Q99PP7 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim33Q99PP7 Gm11989-201ENSMUST00000117240 672 ntBASIC11.86□□□□□ -0.51
Trim33Q99PP7 Gm11362-201ENSMUST00000118838 850 ntBASIC11.86□□□□□ -0.51
Trim33Q99PP7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms