Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.19□□□□□ -0.62
Nkx6-1Q99MA9 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm14247-201ENSMUST00000120950 237 ntBASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm12783-201ENSMUST00000121425 397 ntBASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm12030-201ENSMUST00000121917 223 ntBASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm3150-201ENSMUST00000166418 204 ntBASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm9135-201ENSMUST00000182963 990 ntBASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm18204-201ENSMUST00000209835 793 ntBASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Nkx6-1Q99MA9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Gm25766-201ENSMUST00000104101 131 ntBASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Gm26035-201ENSMUST00000083065 308 ntBASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Nkx6-1Q99MA9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms