Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.75□□□□□ -0.21
Smc1bQ920F6 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.75□□□□□ -0.21
Smc1bQ920F6 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.75□□□□□ -0.21
Smc1bQ920F6 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Gm42937-201ENSMUST00000197360 752 ntBASIC13.75□□□□□ -0.21
Smc1bQ920F6 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Smc1bQ920F6 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.75□□□□□ -0.21
Smc1bQ920F6 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.74□□□□□ -0.21
Smc1bQ920F6 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.74□□□□□ -0.21
Smc1bQ920F6 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.74□□□□□ -0.21
Smc1bQ920F6 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.74□□□□□ -0.21
Smc1bQ920F6 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Gm11892-201ENSMUST00000117711 1202 ntBASIC13.74□□□□□ -0.21
Smc1bQ920F6 Mir1901-201ENSMUST00000122616 78 ntBASIC13.74□□□□□ -0.21
Smc1bQ920F6 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.74□□□□□ -0.21
Smc1bQ920F6 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.74□□□□□ -0.21
Smc1bQ920F6 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Gm19994-201ENSMUST00000217086 586 ntBASIC13.74□□□□□ -0.21
Smc1bQ920F6 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.74□□□□□ -0.21
Smc1bQ920F6 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.74□□□□□ -0.21
Smc1bQ920F6 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Smc1bQ920F6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.74□□□□□ -0.21
Smc1bQ920F6 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.74□□□□□ -0.21
Smc1bQ920F6 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Smc1bQ920F6 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Smc1bQ920F6 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms