Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Gm11960-201ENSMUST00000122068 925 ntBASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Mir3102-201ENSMUST00000175555 104 ntBASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Gm38314-201ENSMUST00000195709 625 ntBASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Gm43184-201ENSMUST00000197247 542 ntBASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Gm18056-201ENSMUST00000207670 568 ntBASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Gm18061-201ENSMUST00000208350 562 ntBASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Gm18063-201ENSMUST00000208529 568 ntBASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Gm18052-201ENSMUST00000208750 559 ntBASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.31□□□□□ -0.44
Pcdhb1Q91Y08 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.3□□□□□ -0.44
Pcdhb1Q91Y08 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 231.6 ms