Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb20Q91XZ9 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm13626-201ENSMUST00000119435 402 ntBASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm5409-201ENSMUST00000160346 698 ntBASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm25135-201ENSMUST00000082648 143 ntBASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm37886-201ENSMUST00000195349 1513 ntBASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm44436-201ENSMUST00000204200 1494 ntBASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm42435-201ENSMUST00000196630 1448 ntBASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.2□□□□□ -0.46
Pcdhb20Q91XZ9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Gm44187-201ENSMUST00000204735 1929 ntBASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 AC169038.1-201ENSMUST00000227378 1352 ntBASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 1700013D24Rik-201ENSMUST00000112537 535 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Gm11451-201ENSMUST00000118946 630 ntBASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Gm11222-201ENSMUST00000119005 738 ntBASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Gm16296-201ENSMUST00000159905 325 ntBASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Gm2991-201ENSMUST00000173338 480 ntBASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Gm4290-201ENSMUST00000206897 814 ntBASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 BC060293-201ENSMUST00000207005 1104 ntBASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Gm19137-201ENSMUST00000213790 1164 ntBASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 AC164295.2-201ENSMUST00000228539 757 ntBASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb20Q91XZ9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms