Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Gm44038-201ENSMUST00000203952 889 ntBASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Gm44069-201ENSMUST00000204898 506 ntBASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Gm28359-201ENSMUST00000187470 1322 ntBASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb3Q91XZ7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm14350-201ENSMUST00000116642 640 ntBASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm12203-201ENSMUST00000118235 598 ntBASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm12209-201ENSMUST00000120089 596 ntBASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm4271-201ENSMUST00000174444 973 ntBASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm5370-201ENSMUST00000187187 574 ntBASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm37922-201ENSMUST00000195596 455 ntBASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm8920-201ENSMUST00000196153 924 ntBASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm42693-201ENSMUST00000196779 631 ntBASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Gm45074-201ENSMUST00000209091 1240 ntBASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdhb3Q91XZ7 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdhb3Q91XZ7 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms