Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Gm11531-201ENSMUST00000117614 555 ntBASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Gm15610-201ENSMUST00000120584 195 ntBASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Gm27320-201ENSMUST00000184892 109 ntBASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdhga11Q91XY8 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhga11Q91XY8 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhga11Q91XY8 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.52□□□□□ -0.56
Pcdhga11Q91XY8 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.52□□□□□ -0.56
Pcdhga11Q91XY8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhga11Q91XY8 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.52□□□□□ -0.56
Pcdhga11Q91XY8 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.52□□□□□ -0.56
Pcdhga11Q91XY8 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.52□□□□□ -0.56
Pcdhga11Q91XY8 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhga11Q91XY8 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
Pcdhga11Q91XY8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhga11Q91XY8 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhga11Q91XY8 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhga11Q91XY8 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdhga11Q91XY8 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Gm11222-201ENSMUST00000119005 738 ntBASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Gm26083-201ENSMUST00000157904 193 ntBASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Gm21769-201ENSMUST00000211922 111 ntBASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Gm19994-201ENSMUST00000217086 586 ntBASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms