Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Gm11989-201ENSMUST00000117240 672 ntBASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Gm11362-201ENSMUST00000118838 850 ntBASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Gm12997-201ENSMUST00000120207 640 ntBASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Gm14277-201ENSMUST00000121195 360 ntBASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Gm27627-201ENSMUST00000183644 150 ntBASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Gm44882-201ENSMUST00000205702 802 ntBASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Gm45433-201ENSMUST00000209386 247 ntBASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga4Q91XY4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm29615-201ENSMUST00000185371 697 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm28224-201ENSMUST00000186078 697 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm29001-201ENSMUST00000186177 697 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm28292-201ENSMUST00000186593 697 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm28101-201ENSMUST00000187608 697 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm29076-201ENSMUST00000187689 697 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm28302-201ENSMUST00000187931 697 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm28646-201ENSMUST00000188220 697 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm28205-201ENSMUST00000189177 697 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm29032-201ENSMUST00000189797 697 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm28695-201ENSMUST00000190300 697 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm37448-201ENSMUST00000192795 697 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm17812-201ENSMUST00000204935 318 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm45186-201ENSMUST00000206874 478 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gm8385-201ENSMUST00000058999 643 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdhga4Q91XY4 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms